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    libSlice_Slice Struct Reference
    [C Interface]

    Detailed Description

    Structure for specifing slice information.
    Examples:

    libSliceExample.c.

    Definition at line 47 of file Slice.h.

    Data Fields

    char * bc
     Null terminated list of bases in {'A', 'C', 'T', 'G', ...}.

    char * qv
     Null terminated list of quality values in [0..99].

    char * rc
     Null terminated list of reverse compliments in {0,1}.

    char c
     Existing consensus.

    unsigned short dcov
     Depth of coverage.

    Field Documentation

    unsigned short libSlice_Slice::dcov
     

    Depth of coverage.

    Note: dcov == strlen(bc) == strlen (qv) == strlen(rc)

    Examples:
    libSliceExample.c.

    Definition at line 63 of file Slice.h.

    The documentation for this struct was generated from the following file: