Slice Tools libSlice |
libSliceExample.outSample output from libSliceExample.c.Shows the results from running calculations with libSlice. ./libSliceExample slice i=0, c=A, dcov=4 j=0 bc=A qv=30 rc=1 j=1 bc=A qv=25 rc=1 j=2 bc=T qv=20 rc=0 j=3 bc=C qv=15 rc=0 slice i=1, c=T, dcov=4 j=0 bc=T qv=30 rc=1 j=1 bc=T qv=30 rc=0 j=2 bc=T qv=20 rc=1 j=3 bc=T qv=15 rc=0 slice i=2, c=Y, dcov=4 j=0 bc=C qv=30 rc=1 j=1 bc=T qv=30 rc=1 j=2 bc=C qv=30 rc=0 j=3 bc=T qv=30 rc=0 testing getConsQC(), getConsensus() slice i=0 c=A qc=8 qv=34 [qvA=34 qvC=0 qvG=0 qvT=0 qvGap=0] testing getConsQCRange(), getConsensusRange() slice i=0 c=A qc=8 qv=34 [qvA=34 qvC=0 qvG=0 qvT=0 qvGap=0] slice i=1 c=T qc=1 qv=95 [qvA=0 qvC=0 qvG=0 qvT=95 qvGap=0] slice i=2 c=Y qc=22 qv=3 [qvA=0 qvC=3 qvG=0 qvT=3 qvGap=0] |