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    libSliceExample.out

    Sample output from libSliceExample.c.

    Shows the results from running calculations with libSlice.

    ./libSliceExample
    
    slice i=0, c=A, dcov=4
      j=0 bc=A qv=30 rc=1
      j=1 bc=A qv=25 rc=1
      j=2 bc=T qv=20 rc=0
      j=3 bc=C qv=15 rc=0
    
    slice i=1, c=T, dcov=4
      j=0 bc=T qv=30 rc=1
      j=1 bc=T qv=30 rc=0
      j=2 bc=T qv=20 rc=1
      j=3 bc=T qv=15 rc=0
    
    slice i=2, c=Y, dcov=4
      j=0 bc=C qv=30 rc=1
      j=1 bc=T qv=30 rc=1
      j=2 bc=C qv=30 rc=0
      j=3 bc=T qv=30 rc=0
    
    testing getConsQC(), getConsensus()
    slice i=0 c=A qc=8 qv=34
    [qvA=34 qvC=0 qvG=0 qvT=0 qvGap=0]
    
    testing getConsQCRange(), getConsensusRange()
    slice i=0 c=A qc=8 qv=34
    [qvA=34 qvC=0 qvG=0 qvT=0 qvGap=0]
    
    slice i=1 c=T qc=1 qv=95
    [qvA=0 qvC=0 qvG=0 qvT=95 qvGap=0]
    
    slice i=2 c=Y qc=22 qv=3
    [qvA=0 qvC=3 qvG=0 qvT=3 qvGap=0]